CRISPR 2025: Revolutionizing Gene Editing & Medicine

CRISPER

Summary

  • CRISPR-Cas9 acts like molecular scissors, precisely editing DNA for therapeutic and research breakthroughs.

  • Advancements include new Cas enzymes, RNA editing, and CRISPR-based therapies for genetic diseases.

  • CRISPR is revolutionizing cancer treatment, antibiotic resistance, and rare disease research.

  • Agricultural innovations include disease-resistant wheat and high-protein soybeans.

  • Ethical concerns like germline editing and equitable access remain key challenges.

CRISPR-based gene editing has emerged as a transformative tool in molecular biology and therapeutic development. Gene editing is a game-changer. It's like having a tiny pair of scissors to precisely snip and change DNA. This technology has the potential to revolutionize medicine as we know it. And in 2025, we're seeing incredible breakthroughs with CRISPR-Cas9, the most popular gene editing tool.

Think of CRISPR-Cas9 as a guided missile system for your genes. It has two main parts:

  • Guide RNA: This acts like a GPS, leading the system to the exact spot in the DNA that needs editing.

  • Cas9 enzyme: This is the "molecular scissor" that cuts the DNA at the targeted location.

Once the DNA is cut, the cell's natural repair mechanisms kick in. This allows scientists to either disrupt a gene or insert new genetic material.

Also Read : Non-Antibiotic Therapies: Combating the Global Threat

CRISPER Gene Editing

CRISPR vs. Other Gene Editing Techniques

CRISPR-Cas9 is one of several gene editing techniques that are currently available. Other gene editing techniques include:

  • Zinc finger nucleases (ZFNs)

  • Transcription activator-like effector nucleases (TALENs)

  • Homing endonucleases

Gene Editing Technique

Target Sequence

Efficiency

Advantages

Disadvantages

Applications

CRISPR-Cas9

Any DNA sequence with a PAM

Variable depends on tthe arget sequence and delivery method

Easy to design and use, can be used to target a wide range of sequences

Can sometimes make off-target cuts

Gene knockout, gene knockin, gene correction, disease modelling, drug discovery, diagnostics

ZFNs

Specific DNA sequences recognized by zinc finger domains

Moderate

High specificity

Difficult to design and use

Gene knockout, gene knockin, gene therapy

TALENs

Specific DNA sequences recognized by TALE domains

Moderate

High specificity

Difficult to design and use

Gene knockout, gene knockin, gene therapy

Homing endonucleases

Specific DNA sequences recognized by the endonuclease

High

Naturally occurring enzymes with high specificity

A limited number of available enzymes

Gene knockout, gene therapy

 

CRISPR is the most popular because it's easier to use and more versatile. However, scientists always work to improve its accuracy and reduce off-target effects. 

Some notable CRISPR advancements:

·       New CRISPR Systems: Scientists are discovering new Cas enzymes with unique properties. For example, Cas12a makes staggered cuts in DNA, which is useful for inserting new genes. 

· CRISPR-based gene therapy: Casgevy was approved to treat sickle cell disease and beta-thalassemia. A six-month-old infant with a rare metabolic disorder was also successfully treated with CRISPR.  

  • New RNA editing technology: Inverna Therapeutics has launched, focusing on sequence-based RNA splice modulation, targeting Huntington's disease. Its proprietary technology enables precise, allele-specific RNA editing with reduced off-target effects. 

  • Development of the PathCrisp assay: The PathCrisp assay by CRISPR BITS combines loop-mediated isothermal amplification with CRISPR-based detection to rapidly identify antibiotic resistance genes directly from culture samples. 

  • Creation of a disease model for Huntington's disease: Researchers from bit.bio have created a disease model for Huntington's disease using induced pluripotent stem cells (iPSCs) generated using CRISPR/Cas9-based gene editing. 

  • FDA approval of CRISPR-transactivator technology: The US FDA has approved using CRISPR-transactivator technology to treat a rare mutation that causes Duchenne muscular dystrophy. 

  • CRISPR for cancer immunotherapy: Researchers use CRISPR-Cas9 to modify immune cells to defeat resistance in hematologic malignancies. 

  • CRISPR for treating various diseases: CRISPR-Cas9 technology is being applied to drive forward drug development for HIV-1, neurofibromatosis-1, and Parkinson's disease. 

  • CRISPR for treating inherited retinal diseases: Swiss researchers have developed a dual adeno-associated viral vector delivering a split-intein adenine base editor to correct the c. 5882G>A ABCA4 mutation in Stargardt disease.  

  • CRISPR for treating muscular dystrophies: Researchers in Germany use CRISPR to correct a common mutation in LGMD2B muscular dystrophy.

  • Prime editing with Nanoscribes: Researchers in France have developed a method for delivering prime editing ribonucleoprotein complexes into human cells using virus-like particles called Nanoscribes.  

  • CRISPR for personalized cancer treatment: American researchers have used CRISPR-Cas9 saturation genome editing to functionally characterize 6,960 BRCA2 variants in the DNA-binding domain, improving cancer risk assessments.  

  • CRISPRi for combating antibiotic resistance: Researchers in Italy have successfully used CRISPRi to repress antibiotic resistance genes. 

  • Protein2PAM for improving CRISPR efficiency: Researchers at Profluent Bio have developed a deep-learning model called Protein2PAM to predict PAM specificity from Cas protein sequences.  

  • CRISPR for disease modeling and drug development: Scientists in the UK have used CRISPR to integrate a reporter gene for non-invasive PET imaging of hiPSC-derived liver organoids in vivo.  

  • Focused ultrasound for CRISPR delivery: Canadian researchers have used focused ultrasound (FUS) with microbubbles to deliver CRISPR-Cas9 RNPs into human iPSCs. 

  • Reducing immunogenicity of CRISPR therapies: Researchers in the USA have redesigned SaCas9 and AsCas12a to reduce immunogenicity. 

  • CRISPR for HIV treatment: Researchers in the USA have used CRISPR-Cas9 to achieve high CCR5 gene editing in human hematopoietic stem progenitor cells. 

  • CRISPR-Cas13 for treating neurodegenerative diseases: Two independent studies have shown the potential of CRISPR-Cas13 for treating C9orf72-linked ALS/FTD by targeting toxic RNA species.  

  • CRISPR for combating antibiotic resistance: Researchers in the UK have developed an engineered CRISPR-Cas9 system to protect bacteria from horizontal gene transfer of AMR genes. 

  • CRISPR for treating viral infections: TUNE Therapeutics has received approval for a Phase 1b trial of epigenetic silencing therapy designed to treat chronic hepatitis B therapy. 

  • CRISPR for treating rare diseases: HuidaGene Therapeutics developed an HG004 gene therapy to treat inherited retinal diseases caused by gene mutations.

Medicine

CRISPR in Agriculture: Beyond Medicine

CRISPR is branching out beyond medicine and making waves in agriculture. It's being used to develop:

  • High-protein soybeans: more nutritious food. 

  • Disease-resistant wheat: less need for fungicides. 

  • Reduced-lignin maize: easier to digest and process. 

Imagine a future with crops that are more resilient, nutritious, and require fewer pesticides. CRISPR is helping to make that a reality.

Ethical Considerations: A Responsible Approach

With great power comes great responsibility. CRISPR raises ethical concerns that need careful consideration:

  • Germline editing: Changes to reproductive cells could have unintended consequences for future generations.

  • Designer babies: CRISPR could be used to enhance human traits, raising concerns about eugenics.

  • Access and equity: The high cost of CRISPR therapies could create disparities in healthcare. 

Open discussions and ethical guidelines are crucial to ensuring the responsible use of this powerful technology.

The Future of CRISPR: A World of Possibilities

CRISPR is still a young technology, but it's already showing incredible promise. As research continues, we can expect even more breakthroughs in the future. Imagine a future where genetic diseases are a thing of the past, and agriculture is more sustainable and efficient. CRISPR is paving the way for a healthier and more equitable future.

Bhawana
Bhawana Bisht

CSIR-Institute of MIcrobial Technology

PhD scholar at CSIR-Institute of Microbial Technology in Chandigarh India,working in the area of Biosensor and Nanodiagnostics.

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